Dca40408.1
Annotation
- 2-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4426)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40408.1 |
52 |
268 |
268 |
57.83 |
217 |
56 |
3e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
936 |
1214 |
1333 |
20.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40408.1 |
52 |
268 |
268 |
32.46 |
217 |
32 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1032 |
1310 |
1428 |
19.53 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4426 |
Augustus |
mRNA |
13222 |
14416 |
. |
+ |
. |
ID=Dca40408.1;Parent=Dca40408 |
| scaffold4426 |
Augustus |
exon |
13222 |
13703 |
. |
+ |
. |
ID=Dca40408.1.exon1;Parent=Dca40408.1 |
| scaffold4426 |
Augustus |
exon |
14092 |
14416 |
. |
+ |
. |
ID=Dca40408.1.exon2;Parent=Dca40408.1 |
