Carnation DB

Dca40451.1

Annotation

10-exons
f-1
sp|E0CR49_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g02510#GO:0005783;GO:0009055;GO:0016853;GO:0015035;GO:0045454;GO:0006662#3F2P1C
AT1G77510.1 | Symbols: ATPDIL1-2, PDI6, ATPDI6, PDIL1-2 | PDI-like 1-2 | chr1:29126742-29129433 FORWARD LENGTH=508
Repeat List (scaffold443)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40451.1	47	149	494	8.5	103	41	5e-15
Target_name	Start	End	Length	Cov(%)
sp\|E0CR49_VITVI	400	498	499	19.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40451.1	22	493	494	61.13	472	64	0
Target_name	Start	End	Length	Cov(%)
AT1G77510.1	24	495	508	92.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold443	Augustus	mRNA	251056	254945	.	-	.	ID=Dca40451.1;Parent=Dca40451
scaffold443	Augustus	exon	251056	251256	.	-	.	ID=Dca40451.1.exon1;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	251505	251617	.	-	.	ID=Dca40451.1.exon2;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	251714	251831	.	-	.	ID=Dca40451.1.exon3;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	251921	252040	.	-	.	ID=Dca40451.1.exon4;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	252171	252305	.	-	.	ID=Dca40451.1.exon5;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	252716	252841	.	-	.	ID=Dca40451.1.exon6;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	252954	253142	.	-	.	ID=Dca40451.1.exon7;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	253227	253514	.	-	.	ID=Dca40451.1.exon8;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	253642	253672	.	-	.	ID=Dca40451.1.exon9;Parent=Dca40451.1
scaffold443	Augus-PASA	exon	254782	254945	.	-	.	ID=Dca40451.1.exon10;Parent=Dca40451.1