Carnation DB

Dca405.1

Annotation

5-exons
f-1
sp|Q75H66_ORYSJ#Putative uncharacterized protein OSJNBb0007E22.22#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0007E22.22#GO:0008270#1F0P0C
sp|Q7F966_ORYSJ#OSJNBa0091C07.2 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0091C07.2#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold1005)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca405.1	704	1116	1204	12.87	413	38	7e-77
Target_name	Start	End	Length	Cov(%)
sp\|Q75H66_ORYSJ	441	850	981	41.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca405.1	702	1195	1204	15.61	494	36	4e-75
Target_name	Start	End	Length	Cov(%)
Os06t0704400-02	276	793	805	64.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1005	Augustus	mRNA	48395	60148	.	-	.	ID=Dca405.1;Parent=Dca405
scaffold1005	Augustus	exon	48395	49420	.	-	.	ID=Dca405.1.exon1;Parent=Dca405.1
scaffold1005	Augustus	exon	49564	50148	.	-	.	ID=Dca405.1.exon2;Parent=Dca405.1
scaffold1005	Augustus	exon	50515	50824	.	-	.	ID=Dca405.1.exon3;Parent=Dca405.1
scaffold1005	Augustus	exon	53143	54725	.	-	.	ID=Dca405.1.exon4;Parent=Dca405.1
scaffold1005	Augustus	exon	60038	60148	.	-	.	ID=Dca405.1.exon5;Parent=Dca405.1