Dca40505.1
Annotation
- 4-exons
- f-1
- sp|G5DXA4_SILLA#Peptidyl-tRNA hydrolase II (PTH2) family protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0004045#1F0P0C
- Repeat List (scaffold444)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40505.1 |
2 |
94 |
116 |
53.44 |
93 |
67 |
7e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G5DXA4_SILLA |
1 |
89 |
176 |
50.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40505.1 |
2 |
94 |
116 |
49.13 |
93 |
62 |
3e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G16870.1 |
1 |
82 |
169 |
48.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold444 |
Augustus |
mRNA |
40898 |
41981 |
. |
- |
. |
ID=Dca40505.1;Parent=Dca40505 |
| scaffold444 |
Augustus |
exon |
40898 |
40933 |
. |
- |
. |
ID=Dca40505.1.exon1;Parent=Dca40505.1 |
| scaffold444 |
Augustus |
exon |
41254 |
41299 |
. |
- |
. |
ID=Dca40505.1.exon2;Parent=Dca40505.1 |
| scaffold444 |
Augustus |
exon |
41619 |
41677 |
. |
- |
. |
ID=Dca40505.1.exon3;Parent=Dca40505.1 |
| scaffold444 |
Augustus |
exon |
41772 |
41981 |
. |
- |
. |
ID=Dca40505.1.exon4;Parent=Dca40505.1 |
