Carnation DB

Dca40514.1

Annotation

6-exons
f-1
sp|B9S8W2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0836370#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Os09t0413600-01 Ribosomal protein L34e domain containing protein.
Repeat List (scaffold444)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40514.1	272	721	721	28.43	450	45	1e-103
Target_name	Start	End	Length	Cov(%)
sp\|B9S8W2_RICCO	335	791	791	57.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40514.1	347	721	721	24.54	375	47	8e-98
Target_name	Start	End	Length	Cov(%)
Os09t0413600-01	761	1136	1137	33.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold444	Augustus	mRNA	103534	108357	.	+	.	ID=Dca40514.1;Parent=Dca40514
scaffold444	Augustus	exon	103534	103607	.	+	.	ID=Dca40514.1.exon1;Parent=Dca40514.1
scaffold444	Augustus	exon	103767	103894	.	+	.	ID=Dca40514.1.exon2;Parent=Dca40514.1
scaffold444	Augustus	exon	104045	105115	.	+	.	ID=Dca40514.1.exon3;Parent=Dca40514.1
scaffold444	Augustus	exon	107166	107582	.	+	.	ID=Dca40514.1.exon4;Parent=Dca40514.1
scaffold444	Augus-PASA	exon	107740	107963	.	+	.	ID=Dca40514.1.exon5;Parent=Dca40514.1
scaffold444	Augus-PASA	exon	108106	108357	.	+	.	ID=Dca40514.1.exon6;Parent=Dca40514.1