Carnation DB

Dca40516.1

Annotation

5-exons
f-1
sp|B9H9V0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819061#GO:0016811#1F0P0C
Os05t0387900-01 Similar to Protein N-terminal glutamine amidohydrolase.
Repeat List (scaffold444)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40516.1	1	207	209	66.02	207	67	1e-77
Target_name	Start	End	Length	Cov(%)
sp\|B9H9V0_POPTR	4	211	213	97.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40516.1	1	209	209	59.8	209	60	4e-74
Target_name	Start	End	Length	Cov(%)
AT2G41760.1	11	221	221	95.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold444	Augustus	mRNA	113864	115873	.	+	.	ID=Dca40516.1;Parent=Dca40516
scaffold444	Augustus	exon	113864	113901	.	+	.	ID=Dca40516.1.exon1;Parent=Dca40516.1
scaffold444	Augustus	exon	114793	114892	.	+	.	ID=Dca40516.1.exon2;Parent=Dca40516.1
scaffold444	Augustus	exon	114985	115193	.	+	.	ID=Dca40516.1.exon3;Parent=Dca40516.1
scaffold444	Augustus	exon	115274	115398	.	+	.	ID=Dca40516.1.exon4;Parent=Dca40516.1
scaffold444	Augustus	exon	115716	115873	.	+	.	ID=Dca40516.1.exon5;Parent=Dca40516.1