Carnation DB

Dca40525.1

Annotation

5-exons
f-1
sp|B9I1E0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_568625#unknown#0F0P0C
Repeat List (scaffold4440)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40525.1	1	82	98	75.51	82	91	6e-40
Target_name	Start	End	Length	Cov(%)
sp\|B9I1E0_POPTR	70	151	157	52.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40525.1	1	82	98	72.44	82	87	3e-38
Target_name	Start	End	Length	Cov(%)
Os07t0631100-02	1	82	90	91.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4440	Augustus	mRNA	44504	45308	.	+	.	ID=Dca40525.1;Parent=Dca40525
scaffold4440	Augustus	exon	44504	44616	.	+	.	ID=Dca40525.1.exon1;Parent=Dca40525.1
scaffold4440	Augustus	exon	44740	44810	.	+	.	ID=Dca40525.1.exon2;Parent=Dca40525.1
scaffold4440	Augustus	exon	45001	45022	.	+	.	ID=Dca40525.1.exon3;Parent=Dca40525.1
scaffold4440	Augustus	exon	45120	45183	.	+	.	ID=Dca40525.1.exon4;Parent=Dca40525.1
scaffold4440	Augustus	exon	45282	45308	.	+	.	ID=Dca40525.1.exon5;Parent=Dca40525.1