Dca40529.1
Annotation
- 3-exons
- f-1
- sp|A5BCC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040650#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|Q9ZVW0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g07010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4442)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40529.1 |
528 |
658 |
658 |
10.79 |
131 |
55 |
7e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCC7_VITVI |
1186 |
1316 |
1316 |
9.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40529.1 |
528 |
638 |
658 |
7.75 |
111 |
46 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
470 |
579 |
1262 |
8.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4442 |
Augustus |
mRNA |
12092 |
14669 |
. |
- |
. |
ID=Dca40529.1;Parent=Dca40529 |
| scaffold4442 |
Augustus |
exon |
12092 |
12491 |
. |
- |
. |
ID=Dca40529.1.exon1;Parent=Dca40529.1 |
| scaffold4442 |
Augustus |
exon |
12756 |
14236 |
. |
- |
. |
ID=Dca40529.1.exon2;Parent=Dca40529.1 |
| scaffold4442 |
Augustus |
exon |
14574 |
14669 |
. |
- |
. |
ID=Dca40529.1.exon3;Parent=Dca40529.1 |
