Carnation DB

Dca40537.1

Annotation

9-exons
f-1
sp|D7U288_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00390#GO:0043169;GO:0004553;GO:0005975#2F1P0C
sp|B9SAQ3_RICCO#Beta-glucosidase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1177960#GO:0008422;GO:0043169;GO:0005975#2F1P0C
Repeat List (scaffold4443)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40537.1	19	149	340	26.17	131	68	1e-45
Target_name	Start	End	Length	Cov(%)
sp\|D7U288_VITVI	708	839	840	15.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40537.1	36	280	340	47.94	245	61	1e-93
Target_name	Start	End	Length	Cov(%)
AT1G02850.4	45	313	521	51.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4443	Augustus	mRNA	23567	26177	.	+	.	ID=Dca40537.1;Parent=Dca40537
scaffold4443	Augustus	exon	23567	23674	.	+	.	ID=Dca40537.1.exon1;Parent=Dca40537.1
scaffold4443	Augustus	exon	23889	23952	.	+	.	ID=Dca40537.1.exon2;Parent=Dca40537.1
scaffold4443	Augustus	exon	24120	24172	.	+	.	ID=Dca40537.1.exon3;Parent=Dca40537.1
scaffold4443	Augustus	exon	24295	24370	.	+	.	ID=Dca40537.1.exon4;Parent=Dca40537.1
scaffold4443	Augustus	exon	24463	24534	.	+	.	ID=Dca40537.1.exon5;Parent=Dca40537.1
scaffold4443	Augustus	exon	24733	24820	.	+	.	ID=Dca40537.1.exon6;Parent=Dca40537.1
scaffold4443	Augustus	exon	24905	25160	.	+	.	ID=Dca40537.1.exon7;Parent=Dca40537.1
scaffold4443	Augustus	exon	25245	25360	.	+	.	ID=Dca40537.1.exon8;Parent=Dca40537.1
scaffold4443	Augustus	exon	25988	26177	.	+	.	ID=Dca40537.1.exon9;Parent=Dca40537.1