Carnation DB

Dca40574.1

Annotation

5-exons
f-1
sp|A9PCC6_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#unknown#0F0P0C
AT5G51700.1 | Symbols: PBS2, ATRAR1, RPR2, RAR1 | protein binding;zinc ion binding | chr5:21001373-21003143 REVERSE LENGTH=226
Repeat List (scaffold445)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40574.1	1	222	222	67.11	222	67	6e-81
Target_name	Start	End	Length	Cov(%)
sp\|A9PCC6_POPTR	1	215	215	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40574.1	8	220	222	63.51	213	65	3e-77
Target_name	Start	End	Length	Cov(%)
AT5G51700.1	9	222	226	94.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold445	Augustus	mRNA	126980	129849	.	-	.	ID=Dca40574.1;Parent=Dca40574
scaffold445	Augustus	exon	126980	127075	.	-	.	ID=Dca40574.1.exon1;Parent=Dca40574.1
scaffold445	Augustus	exon	127285	127505	.	-	.	ID=Dca40574.1.exon2;Parent=Dca40574.1
scaffold445	Augustus	exon	127632	127795	.	-	.	ID=Dca40574.1.exon3;Parent=Dca40574.1
scaffold445	Augustus	exon	128165	128247	.	-	.	ID=Dca40574.1.exon4;Parent=Dca40574.1
scaffold445	Augustus	exon	129745	129849	.	-	.	ID=Dca40574.1.exon5;Parent=Dca40574.1