Dca40616.1
Annotation
- 2-exons
- f-1
- sp|Q9ZQF8_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15540#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold4457)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40616.1 |
1 |
396 |
424 |
36.08 |
396 |
36 |
1e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQF8_ARATH |
476 |
898 |
1225 |
34.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40616.1 |
1 |
196 |
424 |
16.27 |
196 |
36 |
7e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
449 |
643 |
857 |
22.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4457 |
Augustus |
mRNA |
22491 |
24062 |
. |
+ |
. |
ID=Dca40616.1;Parent=Dca40616 |
| scaffold4457 |
Augustus |
exon |
22491 |
23094 |
. |
+ |
. |
ID=Dca40616.1.exon1;Parent=Dca40616.1 |
| scaffold4457 |
Augustus |
exon |
23392 |
24062 |
. |
+ |
. |
ID=Dca40616.1.exon2;Parent=Dca40616.1 |
