Carnation DB

Dca40628.1

Annotation

3-exons
f-1
sp|Q5GA69_SOLLC#Putative polyprotein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#unknown#0F0P0C
Repeat List (scaffold446)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40628.1	56	676	679	65.24	621	64	0
Target_name	Start	End	Length	Cov(%)
sp\|Q5GA69_SOLLC	1	685	687	99.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40628.1	4	660	679	33.72	657	32	6e-92
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	661	1376	1401	51.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold446	Augustus	mRNA	13234	15506	.	+	.	ID=Dca40628.1;Parent=Dca40628
scaffold446	Augustus	exon	13234	13483	.	+	.	ID=Dca40628.1.exon1;Parent=Dca40628.1
scaffold446	Augustus	exon	13599	14980	.	+	.	ID=Dca40628.1.exon2;Parent=Dca40628.1
scaffold446	Augustus	exon	15099	15506	.	+	.	ID=Dca40628.1.exon3;Parent=Dca40628.1
scaffold446	Augustus	mRNA	13577	15506	.	+	.	ID=Dca40628.2;Parent=Dca40628
scaffold446	Augustus	exon	13577	14980	.	+	.	ID=Dca40628.2.exon1;Parent=Dca40628.2
scaffold446	Augustus	exon	15099	15506	.	+	.	ID=Dca40628.2.exon2;Parent=Dca40628.2