Carnation DB

Dca40643.1

Annotation

5-exons
f-1
sp|A5BCW3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0068g01930#GO:0005622;GO:0008270#1F0P1C
AT5G14140.1 | Symbols: | zinc ion binding;nucleic acid binding;zinc ion binding | chr5:4561539-4563513 FORWARD LENGTH=264
Repeat List (scaffold446)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40643.1	15	241	250	68	227	74	5e-94
Target_name	Start	End	Length	Cov(%)
sp\|A5BCW3_VITVI	12	242	253	91.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40643.1	1	241	250	65.6	241	66	1e-90
Target_name	Start	End	Length	Cov(%)
AT5G14140.1	1	252	264	95.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold446	Augus-PASA	mRNA	120686	124685	.	+	.	ID=Dca40643.1;Parent=Dca40643
scaffold446	Augus-PASA	exon	120686	120820	.	+	.	ID=Dca40643.1.exon1;Parent=Dca40643.1
scaffold446	Augus-PASA	exon	121727	121785	.	+	.	ID=Dca40643.1.exon2;Parent=Dca40643.1
scaffold446	Augus-PASA	exon	123086	123284	.	+	.	ID=Dca40643.1.exon3;Parent=Dca40643.1
scaffold446	Augus-PASA	exon	123823	124154	.	+	.	ID=Dca40643.1.exon4;Parent=Dca40643.1
scaffold446	Augus-PASA	exon	124658	124685	.	+	.	ID=Dca40643.1.exon5;Parent=Dca40643.1