Dca40672.1
Annotation
- 2-exons
- f-1
- sp|F4NCH2_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- sp|O82276_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g31080#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold4463)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40672.1 |
278 |
445 |
445 |
21.34 |
168 |
57 |
2e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH2_BETVU |
717 |
884 |
1378 |
12.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40672.1 |
278 |
443 |
445 |
11.01 |
166 |
30 |
3e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0643433-00 |
241 |
405 |
644 |
25.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4463 |
Augustus |
mRNA |
136759 |
141505 |
. |
+ |
. |
ID=Dca40672.1;Parent=Dca40672 |
| scaffold4463 |
Augustus |
exon |
136759 |
137590 |
. |
+ |
. |
ID=Dca40672.1.exon1;Parent=Dca40672.1 |
| scaffold4463 |
Augustus |
exon |
141000 |
141505 |
. |
+ |
. |
ID=Dca40672.1.exon2;Parent=Dca40672.1 |
