Carnation DB

Dca40680.1

Annotation

13-exons
f-1
sp|F6I0Z0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g02620#GO:0005634;GO:0000166;GO:0003723;GO:0006397#2F1P1C
AT2G16940.2 | Symbols: | Splicing factor, CC1-like | chr2:7342869-7347052 REVERSE LENGTH=610
Repeat List (scaffold4465)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40680.1	229	615	616	46.1	387	70	7e-157
Target_name	Start	End	Length	Cov(%)
sp\|F6I0Z0_VITVI	218	628	629	65.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40680.1	1	615	616	52.43	615	50	1e-140
Target_name	Start	End	Length	Cov(%)
AT2G16940.2	1	607	610	99.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4465	Augustus	mRNA	17576	23047	.	+	.	ID=Dca40680.1;Parent=Dca40680
scaffold4465	Augustus	exon	17576	18261	.	+	.	ID=Dca40680.1.exon1;Parent=Dca40680.1
scaffold4465	Augustus	exon	19640	19721	.	+	.	ID=Dca40680.1.exon2;Parent=Dca40680.1
scaffold4465	Augustus	exon	19873	19929	.	+	.	ID=Dca40680.1.exon3;Parent=Dca40680.1
scaffold4465	Augustus	exon	20238	20293	.	+	.	ID=Dca40680.1.exon4;Parent=Dca40680.1
scaffold4465	Augustus	exon	20408	20633	.	+	.	ID=Dca40680.1.exon5;Parent=Dca40680.1
scaffold4465	Augustus	exon	20891	20974	.	+	.	ID=Dca40680.1.exon6;Parent=Dca40680.1
scaffold4465	Augustus	exon	21428	21502	.	+	.	ID=Dca40680.1.exon7;Parent=Dca40680.1
scaffold4465	Augustus	exon	21574	21657	.	+	.	ID=Dca40680.1.exon8;Parent=Dca40680.1
scaffold4465	Augustus	exon	21930	21994	.	+	.	ID=Dca40680.1.exon9;Parent=Dca40680.1
scaffold4465	Augustus	exon	22199	22388	.	+	.	ID=Dca40680.1.exon10;Parent=Dca40680.1
scaffold4465	Augustus	exon	22476	22564	.	+	.	ID=Dca40680.1.exon11;Parent=Dca40680.1
scaffold4465	Augustus	exon	22796	22910	.	+	.	ID=Dca40680.1.exon12;Parent=Dca40680.1
scaffold4465	Augustus	exon	23006	23047	.	+	.	ID=Dca40680.1.exon13;Parent=Dca40680.1