Dca40686.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold4467)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40686.1 |
72 |
752 |
862 |
34.68 |
681 |
41 |
4e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
727 |
1717 |
41.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40686.1 |
551 |
643 |
862 |
3.36 |
93 |
32 |
8e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4467 |
Augustus |
mRNA |
3404 |
6063 |
. |
+ |
. |
ID=Dca40686.1;Parent=Dca40686 |
| scaffold4467 |
Augustus |
exon |
3404 |
5378 |
. |
+ |
. |
ID=Dca40686.1.exon1;Parent=Dca40686.1 |
| scaffold4467 |
Augustus |
exon |
5450 |
6063 |
. |
+ |
. |
ID=Dca40686.1.exon2;Parent=Dca40686.1 |
