Dca40698.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4469)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40698.1 |
1 |
960 |
960 |
54.79 |
960 |
52 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
137 |
1126 |
1501 |
65.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40698.1 |
214 |
960 |
960 |
27.5 |
747 |
36 |
2e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
413 |
1120 |
1539 |
46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4469 |
Augustus |
mRNA |
11555 |
14967 |
. |
- |
. |
ID=Dca40698.1;Parent=Dca40698 |
| scaffold4469 |
Augustus |
exon |
11555 |
11892 |
. |
- |
. |
ID=Dca40698.1.exon1;Parent=Dca40698.1 |
| scaffold4469 |
Augustus |
exon |
12294 |
12371 |
. |
- |
. |
ID=Dca40698.1.exon2;Parent=Dca40698.1 |
| scaffold4469 |
Augustus |
exon |
12501 |
14967 |
. |
- |
. |
ID=Dca40698.1.exon3;Parent=Dca40698.1 |
