Dca40716.1
Annotation
- 4-exons
- f-1
- sp|A9PA64_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#unknown#0F0P0C
- sp|B9S9C2_RICCO#Endoplasmic reticulum-Golgi intermediate compartment protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0971820#unknown#0F0P0C
- Repeat List (scaffold4471)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40716.1 |
22 |
111 |
118 |
66.1 |
90 |
87 |
5e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PA64_POPTR |
267 |
356 |
366 |
24.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40716.1 |
22 |
110 |
118 |
61.86 |
89 |
83 |
4e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G22290.1 |
257 |
345 |
354 |
25.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4471 |
Augustus |
mRNA |
15065 |
17835 |
. |
- |
. |
ID=Dca40716.1;Parent=Dca40716 |
| scaffold4471 |
Augustus |
exon |
15065 |
15129 |
. |
- |
. |
ID=Dca40716.1.exon1;Parent=Dca40716.1 |
| scaffold4471 |
Augustus |
exon |
15647 |
15766 |
. |
- |
. |
ID=Dca40716.1.exon2;Parent=Dca40716.1 |
| scaffold4471 |
Augustus |
exon |
15857 |
15965 |
. |
- |
. |
ID=Dca40716.1.exon3;Parent=Dca40716.1 |
| scaffold4471 |
Augustus |
exon |
17773 |
17835 |
. |
- |
. |
ID=Dca40716.1.exon4;Parent=Dca40716.1 |
