Dca40725.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4472)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40725.1 |
1 |
117 |
119 |
68.9 |
117 |
59 |
5e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
682 |
821 |
896 |
15.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40725.1 |
4 |
105 |
119 |
31.09 |
102 |
30 |
8e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1187 |
1311 |
1401 |
8.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4472 |
Augustus |
mRNA |
46031 |
46459 |
. |
- |
. |
ID=Dca40725.1;Parent=Dca40725 |
| scaffold4472 |
Augustus |
exon |
46031 |
46314 |
. |
- |
. |
ID=Dca40725.1.exon1;Parent=Dca40725.1 |
| scaffold4472 |
Augustus |
exon |
46384 |
46459 |
. |
- |
. |
ID=Dca40725.1.exon2;Parent=Dca40725.1 |
