Dca40772.1
Annotation
- 4-exons
- f-1
- sp|D7U3B1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04850#GO:0005576;GO:0016020;GO:0009664#0F1P2C
- sp|Q5MAJ7_ARATH#Alpha-expansin 19#Arabidopsis thaliana (Mouse-ear cress)#Name=EXPA19#GO:0005576;GO:0016020;GO:0009664#0F1P2C
- Repeat List (scaffold448)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40772.1 |
10 |
161 |
391 |
25.06 |
152 |
65 |
1e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7U3B1_VITVI |
39 |
188 |
240 |
62.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40772.1 |
10 |
175 |
391 |
25.83 |
166 |
57 |
3e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G39270.1 |
61 |
237 |
263 |
67.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold448 |
Augustus |
mRNA |
98078 |
105214 |
. |
+ |
. |
ID=Dca40772.1;Parent=Dca40772 |
| scaffold448 |
Augustus |
exon |
98078 |
98097 |
. |
+ |
. |
ID=Dca40772.1.exon1;Parent=Dca40772.1 |
| scaffold448 |
Augustus |
exon |
101027 |
101493 |
. |
+ |
. |
ID=Dca40772.1.exon2;Parent=Dca40772.1 |
| scaffold448 |
Augustus |
exon |
103696 |
103761 |
. |
+ |
. |
ID=Dca40772.1.exon3;Parent=Dca40772.1 |
| scaffold448 |
Augustus |
exon |
104592 |
105214 |
. |
+ |
. |
ID=Dca40772.1.exon4;Parent=Dca40772.1 |
