Carnation DB

Dca40773.1

Annotation

9-exons
f-1
sp|B9RLP9_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1469950#unknown#0F0P0C
AT5G07940.1 | Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G07980.1); Has 1906 Blast hits to 1127 proteins in 203 species: Archae - 2; Bacteria - 210; Metazoa - 401; Fungi - 205; Plants - 136; Viruses - 0; Other Eukaryotes - 952 (source: NCBI BLink). | chr5:2534720-2540086 FORWARD LENGTH=1526
Repeat List (scaffold448)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40773.1	1	1555	1562	39.3	1555	37	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RLP9_RICCO	1	1654	1690	97.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40773.1	1	496	1562	12.22	496	38	9e-64
Target_name	Start	End	Length	Cov(%)
AT5G07940.1	1	497	1526	32.56

seqname	source	feature	start	end	score	strand	frame	group
scaffold448	Augustus	mRNA	111134	118678	.	+	.	ID=Dca40773.1;Parent=Dca40773
scaffold448	Augustus	exon	111134	111326	.	+	.	ID=Dca40773.1.exon1;Parent=Dca40773.1
scaffold448	Augustus	exon	111512	112959	.	+	.	ID=Dca40773.1.exon2;Parent=Dca40773.1
scaffold448	Augus-PASA	exon	113064	113651	.	+	.	ID=Dca40773.1.exon3;Parent=Dca40773.1
scaffold448	Augus-PASA	exon	113759	113904	.	+	.	ID=Dca40773.1.exon4;Parent=Dca40773.1
scaffold448	Augustus	exon	114681	116390	.	+	.	ID=Dca40773.1.exon5;Parent=Dca40773.1
scaffold448	Augustus	exon	116753	116801	.	+	.	ID=Dca40773.1.exon6;Parent=Dca40773.1
scaffold448	Augustus	exon	116891	117132	.	+	.	ID=Dca40773.1.exon7;Parent=Dca40773.1
scaffold448	Augustus	exon	117218	117325	.	+	.	ID=Dca40773.1.exon8;Parent=Dca40773.1
scaffold448	Augustus	exon	118474	118678	.	+	.	ID=Dca40773.1.exon9;Parent=Dca40773.1