Carnation DB

Dca40782.1

Annotation

7-exons
f-1
sp|D7LKP8_ARALL#Oxidoreductase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_482783#GO:0016491#1F0P0C
Repeat List (scaffold4481)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40782.1	4	311	311	67.84	308	68	3e-125
Target_name	Start	End	Length	Cov(%)
sp\|D7LKP8_ARALL	5	315	315	98.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40782.1	4	311	311	67.2	308	67	1e-124
Target_name	Start	End	Length	Cov(%)
AT2G37770.2	5	315	315	98.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4481	Augus-PASA	mRNA	2705	4965	.	+	.	ID=Dca40782.1;Parent=Dca40782
scaffold4481	Augus-PASA	exon	2705	2809	.	+	.	ID=Dca40782.1.exon1;Parent=Dca40782.1
scaffold4481	Augus-PASA	exon	3395	3445	.	+	.	ID=Dca40782.1.exon2;Parent=Dca40782.1
scaffold4481	Augus-PASA	exon	3561	3637	.	+	.	ID=Dca40782.1.exon3;Parent=Dca40782.1
scaffold4481	Augus-PASA	exon	3781	3868	.	+	.	ID=Dca40782.1.exon4;Parent=Dca40782.1
scaffold4481	Augus-PASA	exon	3961	4236	.	+	.	ID=Dca40782.1.exon5;Parent=Dca40782.1
scaffold4481	Augus-PASA	exon	4352	4603	.	+	.	ID=Dca40782.1.exon6;Parent=Dca40782.1
scaffold4481	Augus-PASA	exon	4879	4965	.	+	.	ID=Dca40782.1.exon7;Parent=Dca40782.1