Carnation DB

Dca40866.1

Annotation

5-exons
f-1
sp|D7SKJ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04340#GO:0003676;GO:0000166#2F0P0C
AT5G59950.5 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:24140235-24141504 FORWARD LENGTH=245
Repeat List (scaffold4499)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40866.1	1	244	252	62.69	244	64	6e-71
Target_name	Start	End	Length	Cov(%)
sp\|D7SKJ4_VITVI	1	242	243	99.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40866.1	1	244	252	52.38	244	51	6e-55
Target_name	Start	End	Length	Cov(%)
AT5G59950.5	1	244	245	99.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4499	Augustus	mRNA	23929	25884	.	+	.	ID=Dca40866.1;Parent=Dca40866
scaffold4499	Augustus	exon	23929	24108	.	+	.	ID=Dca40866.1.exon1;Parent=Dca40866.1
scaffold4499	Augustus	exon	24229	24375	.	+	.	ID=Dca40866.1.exon2;Parent=Dca40866.1
scaffold4499	Augustus	exon	25097	25165	.	+	.	ID=Dca40866.1.exon3;Parent=Dca40866.1
scaffold4499	Augustus	exon	25253	25437	.	+	.	ID=Dca40866.1.exon4;Parent=Dca40866.1
scaffold4499	Augustus	exon	25707	25884	.	+	.	ID=Dca40866.1.exon5;Parent=Dca40866.1