Carnation DB

Dca40870.1

Annotation

8-exons
f-1
sp|Q2R1R7_ORYSJ#AT hook motif-containing protein, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g38300#GO:0005524;GO:0004386#2F0P0C
Repeat List (scaffold45)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40870.1	242	530	534	25.84	289	48	4e-74
Target_name	Start	End	Length	Cov(%)
sp\|Q2R1R7_ORYSJ	275	566	1618	18.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40870.1	242	519	534	24.9	278	48	3e-73
Target_name	Start	End	Length	Cov(%)
Os05t0523100-01	32	312	313	89.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold45	Augustus	mRNA	7722	10972	.	+	.	ID=Dca40870.1;Parent=Dca40870
scaffold45	Augustus	exon	7722	8052	.	+	.	ID=Dca40870.1.exon1;Parent=Dca40870.1
scaffold45	Augustus	exon	8763	8822	.	+	.	ID=Dca40870.1.exon2;Parent=Dca40870.1
scaffold45	Augustus	exon	9151	9210	.	+	.	ID=Dca40870.1.exon3;Parent=Dca40870.1
scaffold45	Augustus	exon	9326	9385	.	+	.	ID=Dca40870.1.exon4;Parent=Dca40870.1
scaffold45	Augustus	exon	9492	9551	.	+	.	ID=Dca40870.1.exon5;Parent=Dca40870.1
scaffold45	Augustus	exon	9774	9866	.	+	.	ID=Dca40870.1.exon6;Parent=Dca40870.1
scaffold45	Augustus	exon	9938	10003	.	+	.	ID=Dca40870.1.exon7;Parent=Dca40870.1
scaffold45	Augustus	exon	10098	10972	.	+	.	ID=Dca40870.1.exon8;Parent=Dca40870.1