Dca40880.1
Annotation
- 2-exons
- f-1
- sp|A5CBQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013115#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold45)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40880.1 |
17 |
1067 |
1093 |
48.03 |
1051 |
50 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CBQ4_VITVI |
129 |
1140 |
1178 |
85.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40880.1 |
25 |
1067 |
1093 |
31.19 |
1043 |
33 |
5e-143
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1361 |
1401 |
70.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold45 |
Augustus |
mRNA |
116172 |
120376 |
. |
+ |
. |
ID=Dca40880.1;Parent=Dca40880 |
| scaffold45 |
Augustus |
exon |
116172 |
119374 |
. |
+ |
. |
ID=Dca40880.1.exon1;Parent=Dca40880.1 |
| scaffold45 |
Augustus |
exon |
120298 |
120376 |
. |
+ |
. |
ID=Dca40880.1.exon2;Parent=Dca40880.1 |
