Carnation DB

Dca40894.1

Annotation

8-exons
f-1
sp|B9I374_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834324#GO:0005622;GO:0016020;GO:0005525;GO:0007264#1F1P2C
Os02t0742200-02 Small GTP-binding protein OsRac3.
Repeat List (scaffold45)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40894.1	1	210	210	87.14	210	87	3e-106
Target_name	Start	End	Length	Cov(%)
sp\|B9I374_POPTR	1	211	211	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40894.1	1	199	210	82.85	199	87	1e-100
Target_name	Start	End	Length	Cov(%)
Os02t0742200-02	1	200	215	93.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold45	Augus-PASA	mRNA	223493	226453	.	+	.	ID=Dca40894.1;Parent=Dca40894
scaffold45	Augus-PASA	exon	223493	223597	.	+	.	ID=Dca40894.1.exon1;Parent=Dca40894.1
scaffold45	Augus-PASA	exon	224578	224665	.	+	.	ID=Dca40894.1.exon2;Parent=Dca40894.1
scaffold45	Augus-PASA	exon	225047	225156	.	+	.	ID=Dca40894.1.exon3;Parent=Dca40894.1
scaffold45	Augus-PASA	exon	225258	225321	.	+	.	ID=Dca40894.1.exon4;Parent=Dca40894.1
scaffold45	Augus-PASA	exon	225506	225570	.	+	.	ID=Dca40894.1.exon5;Parent=Dca40894.1
scaffold45	Augus-PASA	exon	225657	225722	.	+	.	ID=Dca40894.1.exon6;Parent=Dca40894.1
scaffold45	Augus-PASA	exon	226115	226212	.	+	.	ID=Dca40894.1.exon7;Parent=Dca40894.1
scaffold45	Augus-PASA	exon	226417	226453	.	+	.	ID=Dca40894.1.exon8;Parent=Dca40894.1