Carnation DB

Dca40896.1

Annotation

7-exons
f-1
sp|A9PE48_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827243#GO:0009055;GO:0020037#2F0P0C
Os05t0301700-01 Similar to Cytochrome c1 (Fragment).
Repeat List (scaffold45)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40896.1	1	309	309	84.78	309	84	1e-151
Target_name	Start	End	Length	Cov(%)
sp\|A9PE48_POPTR	1	310	310	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40896.1	1	309	309	81.87	309	82	7e-141
Target_name	Start	End	Length	Cov(%)
Os05t0301700-01	1	304	305	99.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold45	Augustus	mRNA	239828	244116	.	+	.	ID=Dca40896.1;Parent=Dca40896
scaffold45	Augustus	exon	239828	239887	.	+	.	ID=Dca40896.1.exon1;Parent=Dca40896.1
scaffold45	Augus-PASA	exon	241667	241884	.	+	.	ID=Dca40896.1.exon2;Parent=Dca40896.1
scaffold45	Augus-PASA	exon	241960	242239	.	+	.	ID=Dca40896.1.exon3;Parent=Dca40896.1
scaffold45	Augus-PASA	exon	242335	242406	.	+	.	ID=Dca40896.1.exon4;Parent=Dca40896.1
scaffold45	Augus-PASA	exon	243348	243464	.	+	.	ID=Dca40896.1.exon5;Parent=Dca40896.1
scaffold45	Augus-PASA	exon	243851	243916	.	+	.	ID=Dca40896.1.exon6;Parent=Dca40896.1
scaffold45	Augus-PASA	exon	244000	244116	.	+	.	ID=Dca40896.1.exon7;Parent=Dca40896.1