Carnation DB

Dca40926.1

Annotation

5-exons
f-1
sp|E0CQF4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g12780#GO:0016597;GO:0004585#2F0P0C
sp|E5GCI7_CUCME#Ornithine carbamoyltransferase#Cucumis melo subsp melo#unknown#GO:0016597;GO:0004585#2F0P0C
Repeat List (scaffold450)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40926.1	24	370	371	77.62	347	83	2e-171
Target_name	Start	End	Length	Cov(%)
sp\|E0CQF4_VITVI	30	377	378	92.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40926.1	1	370	371	76.28	370	76	1e-159
Target_name	Start	End	Length	Cov(%)
AT1G75330.1	1	374	375	99.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold450	Augus-PASA	mRNA	121644	125434	.	-	.	ID=Dca40926.1;Parent=Dca40926
scaffold450	Augus-PASA	exon	121644	121826	.	-	.	ID=Dca40926.1.exon1;Parent=Dca40926.1
scaffold450	Augus-PASA	exon	122439	122714	.	-	.	ID=Dca40926.1.exon2;Parent=Dca40926.1
scaffold450	Augus-PASA	exon	122807	122938	.	-	.	ID=Dca40926.1.exon3;Parent=Dca40926.1
scaffold450	Augus-PASA	exon	123488	123822	.	-	.	ID=Dca40926.1.exon4;Parent=Dca40926.1
scaffold450	Augus-PASA	exon	125245	125434	.	-	.	ID=Dca40926.1.exon5;Parent=Dca40926.1