Carnation DB

Dca40935.1

Annotation

7-exons
f-1
sp|B9HLD4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766605#GO:0005488#1F0P0C
AT1G13160.1 | Symbols: | ARM repeat superfamily protein | chr1:4484634-4488388 FORWARD LENGTH=804
Repeat List (scaffold4502)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40935.1	3	197	351	32.76	195	42	7e-45
Target_name	Start	End	Length	Cov(%)
sp\|B9HLD4_POPTR	7	282	791	34.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40935.1	3	197	351	29.91	195	39	1e-33
Target_name	Start	End	Length	Cov(%)
AT1G13160.1	14	287	804	34.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4502	Augustus	mRNA	6859	8559	.	-	.	ID=Dca40935.1;Parent=Dca40935
scaffold4502	Augustus	exon	6859	7338	.	-	.	ID=Dca40935.1.exon1;Parent=Dca40935.1
scaffold4502	Augustus	exon	7473	7611	.	-	.	ID=Dca40935.1.exon2;Parent=Dca40935.1
scaffold4502	Augustus	exon	7729	7853	.	-	.	ID=Dca40935.1.exon3;Parent=Dca40935.1
scaffold4502	Augustus	exon	7930	7938	.	-	.	ID=Dca40935.1.exon4;Parent=Dca40935.1
scaffold4502	Augustus	exon	8021	8107	.	-	.	ID=Dca40935.1.exon5;Parent=Dca40935.1
scaffold4502	Augustus	exon	8194	8222	.	-	.	ID=Dca40935.1.exon6;Parent=Dca40935.1
scaffold4502	Augustus	exon	8373	8559	.	-	.	ID=Dca40935.1.exon7;Parent=Dca40935.1