Dca40936.1
Annotation
- 3-exons
- f-1
- sp|F4NCH2_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- sp|B2BXY8_9BRAS#Non-LTR retrotransposon transposase#Arabidopsis cebennensis#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold4502)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40936.1 |
38 |
321 |
342 |
31.57 |
284 |
33 |
6e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH2_BETVU |
891 |
1224 |
1378 |
24.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40936.1 |
216 |
333 |
342 |
10.52 |
118 |
31 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G42905.1 |
53 |
167 |
258 |
44.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4502 |
Augustus |
mRNA |
13459 |
14916 |
. |
- |
. |
ID=Dca40936.1;Parent=Dca40936 |
| scaffold4502 |
Augustus |
exon |
13459 |
13844 |
. |
- |
. |
ID=Dca40936.1.exon1;Parent=Dca40936.1 |
| scaffold4502 |
Augustus |
exon |
13982 |
14447 |
. |
- |
. |
ID=Dca40936.1.exon2;Parent=Dca40936.1 |
| scaffold4502 |
Augustus |
exon |
14740 |
14916 |
. |
- |
. |
ID=Dca40936.1.exon3;Parent=Dca40936.1 |
