Carnation DB

Dca40952.1

Annotation

12-exons
f-1
sp|D7TQ66_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g00240#GO:0005622;GO:0003676;GO:0008270#2F0P1C
sp|G7IYR4_MEDTR#Zinc finger protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g014130#GO:0005622;GO:0003676;GO:0008270#2F0P1C
Repeat List (scaffold4506)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40952.1	658	976	976	18.75	319	56	4e-98
Target_name	Start	End	Length	Cov(%)
sp\|D7TQ66_VITVI	63	388	390	83.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40952.1	695	954	976	15.57	260	48	9e-75
Target_name	Start	End	Length	Cov(%)
AT1G72050.2	81	402	412	78.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4506	Augustus	mRNA	6061	15398	.	+	.	ID=Dca40952.1;Parent=Dca40952
scaffold4506	Augustus	exon	6061	6250	.	+	.	ID=Dca40952.1.exon1;Parent=Dca40952.1
scaffold4506	Augustus	exon	6331	6452	.	+	.	ID=Dca40952.1.exon2;Parent=Dca40952.1
scaffold4506	Augustus	exon	7142	7196	.	+	.	ID=Dca40952.1.exon3;Parent=Dca40952.1
scaffold4506	Augustus	exon	9026	9238	.	+	.	ID=Dca40952.1.exon4;Parent=Dca40952.1
scaffold4506	Augustus	exon	9377	10092	.	+	.	ID=Dca40952.1.exon5;Parent=Dca40952.1
scaffold4506	Augustus	exon	10220	10574	.	+	.	ID=Dca40952.1.exon6;Parent=Dca40952.1
scaffold4506	Augustus	exon	10663	10963	.	+	.	ID=Dca40952.1.exon7;Parent=Dca40952.1
scaffold4506	Augustus	exon	13973	14135	.	+	.	ID=Dca40952.1.exon8;Parent=Dca40952.1
scaffold4506	Augustus	exon	14246	14547	.	+	.	ID=Dca40952.1.exon9;Parent=Dca40952.1
scaffold4506	Augustus	exon	14641	14833	.	+	.	ID=Dca40952.1.exon10;Parent=Dca40952.1
scaffold4506	Augustus	exon	14976	15119	.	+	.	ID=Dca40952.1.exon11;Parent=Dca40952.1
scaffold4506	Augustus	exon	15222	15398	.	+	.	ID=Dca40952.1.exon12;Parent=Dca40952.1