Dca40954.1
Annotation
- 4-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4507)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40954.1 |
1 |
134 |
283 |
36.74 |
134 |
78 |
1e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
669 |
802 |
896 |
14.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40954.1 |
6 |
133 |
283 |
18.02 |
128 |
40 |
9e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1303 |
1401 |
9.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4507 |
Augustus |
mRNA |
5442 |
8812 |
. |
+ |
. |
ID=Dca40954.1;Parent=Dca40954 |
| scaffold4507 |
Augustus |
exon |
5442 |
5841 |
. |
+ |
. |
ID=Dca40954.1.exon1;Parent=Dca40954.1 |
| scaffold4507 |
Augustus |
exon |
8027 |
8106 |
. |
+ |
. |
ID=Dca40954.1.exon2;Parent=Dca40954.1 |
| scaffold4507 |
Augustus |
exon |
8211 |
8363 |
. |
+ |
. |
ID=Dca40954.1.exon3;Parent=Dca40954.1 |
| scaffold4507 |
Augustus |
exon |
8594 |
8812 |
. |
+ |
. |
ID=Dca40954.1.exon4;Parent=Dca40954.1 |
