Carnation DB

Dca40966.1

Annotation

6-exons
f-1
sp|B9I2B3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_661644#GO:0016021#0F0P1C
AT5G24650.1 | Symbols: | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr5:8437123-8438859 FORWARD LENGTH=259
Repeat List (scaffold451)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40966.1	6	261	263	67.3	256	69	6e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9I2B3_POPTR	2	258	262	98.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40966.1	23	262	263	53.99	240	60	1e-77
Target_name	Start	End	Length	Cov(%)
AT5G24650.1	24	255	259	89.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold451	Augustus	mRNA	24564	27403	.	+	.	ID=Dca40966.1;Parent=Dca40966
scaffold451	Augustus	exon	24564	24869	.	+	.	ID=Dca40966.1.exon1;Parent=Dca40966.1
scaffold451	Augustus	exon	26035	26150	.	+	.	ID=Dca40966.1.exon2;Parent=Dca40966.1
scaffold451	Augustus	exon	26358	26484	.	+	.	ID=Dca40966.1.exon3;Parent=Dca40966.1
scaffold451	Augustus	exon	26769	26917	.	+	.	ID=Dca40966.1.exon4;Parent=Dca40966.1
scaffold451	Augustus	exon	27221	27283	.	+	.	ID=Dca40966.1.exon5;Parent=Dca40966.1
scaffold451	Augustus	exon	27373	27403	.	+	.	ID=Dca40966.1.exon6;Parent=Dca40966.1