Dca40977.1
Annotation
- 4-exons
- f-1
- sp|B9S1X9_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1323900#GO:0005488#1F0P0C
- Repeat List (scaffold451)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40977.1 |
76 |
513 |
516 |
55.23 |
438 |
66 |
2e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9S1X9_RICCO |
17 |
454 |
498 |
87.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40977.1 |
76 |
515 |
516 |
48.25 |
440 |
57 |
1e-145
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0710800-01 |
48 |
486 |
493 |
89.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold451 |
Augustus |
mRNA |
84365 |
86804 |
. |
+ |
. |
ID=Dca40977.1;Parent=Dca40977 |
| scaffold451 |
Augustus |
exon |
84365 |
85588 |
. |
+ |
. |
ID=Dca40977.1.exon1;Parent=Dca40977.1 |
| scaffold451 |
Augustus |
exon |
86295 |
86447 |
. |
+ |
. |
ID=Dca40977.1.exon2;Parent=Dca40977.1 |
| scaffold451 |
Augustus |
exon |
86528 |
86599 |
. |
+ |
. |
ID=Dca40977.1.exon3;Parent=Dca40977.1 |
| scaffold451 |
Augustus |
exon |
86703 |
86804 |
. |
+ |
. |
ID=Dca40977.1.exon4;Parent=Dca40977.1 |
