Dca40995.1
Annotation
- 3-exons
- f-1
- sp|D7TTH5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g00480#GO:0005737;GO:0005524;GO:0003677;GO:0004386;GO:0008270;GO:0000184#4F1P1C
- AT5G47010.1 | Symbols: UPF1, LBA1, ATUPF1 | RNA helicase, putative | chr5:19072009-19078856 FORWARD LENGTH=1254
- Repeat List (scaffold4512)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40995.1 |
1 |
132 |
132 |
69.69 |
132 |
69 |
2e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TTH5_VITVI |
1133 |
1267 |
1267 |
10.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40995.1 |
1 |
105 |
132 |
46.96 |
105 |
60 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G47010.1 |
1130 |
1233 |
1254 |
8.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4512 |
Augustus |
mRNA |
4291 |
5221 |
. |
- |
. |
ID=Dca40995.1;Parent=Dca40995 |
| scaffold4512 |
Augustus |
exon |
4291 |
4437 |
. |
- |
. |
ID=Dca40995.1.exon1;Parent=Dca40995.1 |
| scaffold4512 |
Augustus |
exon |
4896 |
5015 |
. |
- |
. |
ID=Dca40995.1.exon2;Parent=Dca40995.1 |
| scaffold4512 |
Augustus |
exon |
5090 |
5221 |
. |
- |
. |
ID=Dca40995.1.exon3;Parent=Dca40995.1 |
