Dca41049.1
Annotation
- 2-exons
- f-1
- sp|Q9FL83_ARATH#Non-LTR retroelement reverse transcriptase-like protein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold4520)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41049.1 |
59 |
238 |
239 |
31.38 |
180 |
42 |
5e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FL83_ARATH |
404 |
583 |
1223 |
14.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41049.1 |
111 |
239 |
239 |
21.33 |
129 |
40 |
5e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
351 |
479 |
857 |
15.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4520 |
Augustus |
mRNA |
24242 |
25222 |
. |
- |
. |
ID=Dca41049.1;Parent=Dca41049 |
| scaffold4520 |
Augustus |
exon |
24242 |
24808 |
. |
- |
. |
ID=Dca41049.1.exon1;Parent=Dca41049.1 |
| scaffold4520 |
Augustus |
exon |
25070 |
25222 |
. |
- |
. |
ID=Dca41049.1.exon2;Parent=Dca41049.1 |
