Dca4106.1
Annotation
- 4-exons
- f-2
- sp|F6GWV6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g01950#unknown#0F0P0C
- sp|B9HF20_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1083573#unknown#0F0P0C
- Repeat List (scaffold11509)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4106.1 |
1 |
27 |
203 |
11.82 |
27 |
89 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6GWV6_VITVI |
91 |
117 |
413 |
6.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4106.1 |
45 |
159 |
203 |
33 |
115 |
55 |
9e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0163400-01 |
1 |
122 |
446 |
27.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11509 |
Augustus |
mRNA |
770 |
2153 |
. |
+ |
. |
ID=Dca4106.1;Parent=Dca4106 |
| scaffold11509 |
Augustus |
exon |
770 |
851 |
. |
+ |
. |
ID=Dca4106.1.exon1;Parent=Dca4106.1 |
| scaffold11509 |
Augustus |
exon |
1467 |
1862 |
. |
+ |
. |
ID=Dca4106.1.exon2;Parent=Dca4106.1 |
| scaffold11509 |
Augustus |
exon |
1926 |
1978 |
. |
+ |
. |
ID=Dca4106.1.exon3;Parent=Dca4106.1 |
| scaffold11509 |
Augustus |
exon |
2072 |
2153 |
. |
+ |
. |
ID=Dca4106.1.exon4;Parent=Dca4106.1 |
