Carnation DB

Dca41088.1

Annotation

6-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
AT3G24255.1 | Symbols: | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chr3:8789471-8793208 FORWARD LENGTH=746
Repeat List (scaffold453)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41088.1	94	175	540	5.74	82	38	4e-10
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	494	576	1110	7.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41088.1	229	356	540	9.07	128	39	9e-23
Target_name	Start	End	Length	Cov(%)
AT3G24255.1	12	139	746	17.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold453	Augustus	mRNA	1515	6624	.	-	.	ID=Dca41088.1;Parent=Dca41088
scaffold453	Augustus	exon	1515	1952	.	-	.	ID=Dca41088.1.exon1;Parent=Dca41088.1
scaffold453	Augustus	exon	3608	3707	.	-	.	ID=Dca41088.1.exon2;Parent=Dca41088.1
scaffold453	Augustus	exon	3981	4533	.	-	.	ID=Dca41088.1.exon3;Parent=Dca41088.1
scaffold453	Augustus	exon	5222	5474	.	-	.	ID=Dca41088.1.exon4;Parent=Dca41088.1
scaffold453	Augustus	exon	5913	6104	.	-	.	ID=Dca41088.1.exon5;Parent=Dca41088.1
scaffold453	Augustus	exon	6538	6624	.	-	.	ID=Dca41088.1.exon6;Parent=Dca41088.1