Dca41102.1
Annotation
- 4-exons
- f-1
- sp|B9N7U9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_584200#unknown#0F0P0C
- sp|Q0WPN1_ARATH#Putative reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At1g10160#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold4530)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41102.1 |
327 |
568 |
570 |
14.21 |
242 |
34 |
1e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N7U9_POPTR |
513 |
750 |
819 |
29.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41102.1 |
343 |
568 |
570 |
12.8 |
226 |
32 |
1e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
240 |
460 |
626 |
35.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4530 |
Augustus |
mRNA |
17165 |
19486 |
. |
+ |
. |
ID=Dca41102.1;Parent=Dca41102 |
| scaffold4530 |
Augustus |
exon |
17165 |
17576 |
. |
+ |
. |
ID=Dca41102.1.exon1;Parent=Dca41102.1 |
| scaffold4530 |
Augustus |
exon |
17731 |
17775 |
. |
+ |
. |
ID=Dca41102.1.exon2;Parent=Dca41102.1 |
| scaffold4530 |
Augustus |
exon |
17848 |
18309 |
. |
+ |
. |
ID=Dca41102.1.exon3;Parent=Dca41102.1 |
| scaffold4530 |
Augustus |
exon |
18693 |
19486 |
. |
+ |
. |
ID=Dca41102.1.exon4;Parent=Dca41102.1 |
