Carnation DB

Dca41123.1

Annotation

5-exons
f-1
sp|B9SME8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1073680#unknown#0F0P0C
Os06t0642900-01 Ubiquitin system component Cue domain containing protein.
Repeat List (scaffold4536)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41123.1	1	275	275	58.18	275	56	7e-81
Target_name	Start	End	Length	Cov(%)
sp\|B9SME8_RICCO	1	282	282	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41123.1	1	275	275	48.72	275	46	1e-63
Target_name	Start	End	Length	Cov(%)
Os06t0642900-01	1	275	276	99.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4536	Augus-PASA	mRNA	6765	9834	.	+	.	ID=Dca41123.1;Parent=Dca41123
scaffold4536	Augus-PASA	exon	6765	6977	.	+	.	ID=Dca41123.1.exon1;Parent=Dca41123.1
scaffold4536	Augus-PASA	exon	8807	8936	.	+	.	ID=Dca41123.1.exon2;Parent=Dca41123.1
scaffold4536	Augus-PASA	exon	9031	9254	.	+	.	ID=Dca41123.1.exon3;Parent=Dca41123.1
scaffold4536	Augus-PASA	exon	9383	9556	.	+	.	ID=Dca41123.1.exon4;Parent=Dca41123.1
scaffold4536	Augus-PASA	exon	9748	9834	.	+	.	ID=Dca41123.1.exon5;Parent=Dca41123.1