Carnation DB

Dca41153.1

Annotation

5-exons
f-1
sp|F4NCH2_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold4540)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41153.1	261	442	444	21.62	182	53	2e-53
Target_name	Start	End	Length	Cov(%)
sp\|F4NCH2_BETVU	415	596	1378	13.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41153.1	285	441	444	15.99	157	46	9e-35
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	352	508	857	18.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4540	Augustus	mRNA	18634	21624	.	+	.	ID=Dca41153.1;Parent=Dca41153
scaffold4540	Augustus	exon	18634	19083	.	+	.	ID=Dca41153.1.exon1;Parent=Dca41153.1
scaffold4540	Augustus	exon	19631	19735	.	+	.	ID=Dca41153.1.exon2;Parent=Dca41153.1
scaffold4540	Augustus	exon	19850	19943	.	+	.	ID=Dca41153.1.exon3;Parent=Dca41153.1
scaffold4540	Augustus	exon	20138	20230	.	+	.	ID=Dca41153.1.exon4;Parent=Dca41153.1
scaffold4540	Augustus	exon	21032	21624	.	+	.	ID=Dca41153.1.exon5;Parent=Dca41153.1