Carnation DB

Dca4116.1

Annotation

6-exons
f-1
sp|D7TWF4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0066g00150#GO:0043565;GO:0003700;GO:0008270#3F0P0C
Repeat List (scaffold1151)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4116.1	4	292	293	47.09	289	39	5e-47
Target_name	Start	End	Length	Cov(%)
sp\|D7TWF4_VITVI	13	366	367	96.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4116.1	4	293	293	31.05	290	31	3e-27
Target_name	Start	End	Length	Cov(%)
AT5G40600.1	91	325	325	72.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1151	Augus-PASA	mRNA	58214	63930	.	+	.	ID=Dca4116.1;Parent=Dca4116
scaffold1151	Augus-PASA	exon	58214	58519	.	+	.	ID=Dca4116.1.exon1;Parent=Dca4116.1
scaffold1151	Augus-PASA	exon	61295	61498	.	+	.	ID=Dca4116.1.exon2;Parent=Dca4116.1
scaffold1151	Augus-PASA	exon	62731	62820	.	+	.	ID=Dca4116.1.exon3;Parent=Dca4116.1
scaffold1151	Augus-PASA	exon	62989	63047	.	+	.	ID=Dca4116.1.exon4;Parent=Dca4116.1
scaffold1151	Augus-PASA	exon	63625	63775	.	+	.	ID=Dca4116.1.exon5;Parent=Dca4116.1
scaffold1151	Augus-PASA	exon	63859	63930	.	+	.	ID=Dca4116.1.exon6;Parent=Dca4116.1