Carnation DB

Dca4126.1

Annotation

7-exons
f-1
sp|F6GU20_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g02600#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P1C
sp|G7L3U2_MEDTR#Chromodomain-helicase-DNA-binding protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g101690#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P1C
Repeat List (scaffold1152)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4126.1	152	511	522	31.03	360	45	7e-81
Target_name	Start	End	Length	Cov(%)
sp\|F6GU20_VITVI	559	920	1120	32.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4126.1	135	513	522	29.5	379	40	2e-70
Target_name	Start	End	Length	Cov(%)
Os06t0102800-01	701	1077	1274	29.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1152	Augustus	mRNA	20814	25455	.	+	.	ID=Dca4126.1;Parent=Dca4126
scaffold1152	Augustus	exon	20814	20955	.	+	.	ID=Dca4126.1.exon1;Parent=Dca4126.1
scaffold1152	Augustus	exon	21712	21766	.	+	.	ID=Dca4126.1.exon2;Parent=Dca4126.1
scaffold1152	Augustus	exon	22207	22282	.	+	.	ID=Dca4126.1.exon3;Parent=Dca4126.1
scaffold1152	Augustus	exon	22974	23045	.	+	.	ID=Dca4126.1.exon4;Parent=Dca4126.1
scaffold1152	Augustus	exon	23429	23695	.	+	.	ID=Dca4126.1.exon5;Parent=Dca4126.1
scaffold1152	Augustus	exon	24046	24219	.	+	.	ID=Dca4126.1.exon6;Parent=Dca4126.1
scaffold1152	Augustus	exon	24673	25455	.	+	.	ID=Dca4126.1.exon7;Parent=Dca4126.1