Dca41384.1
Annotation
- 4-exons
- f-1
- sp|A5BRL2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013478#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- sp|Q2QPU3_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g33280#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold459)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41384.1 |
1 |
612 |
612 |
50.81 |
612 |
44 |
5e-158
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BRL2_VITVI |
85 |
785 |
1122 |
62.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41384.1 |
397 |
527 |
612 |
9.8 |
131 |
46 |
4e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
455 |
586 |
591 |
22.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold459 |
Augustus |
mRNA |
235061 |
238571 |
. |
+ |
. |
ID=Dca41384.1;Parent=Dca41384 |
| scaffold459 |
Augustus |
exon |
235061 |
235273 |
. |
+ |
. |
ID=Dca41384.1.exon1;Parent=Dca41384.1 |
| scaffold459 |
Augustus |
exon |
235370 |
236153 |
. |
+ |
. |
ID=Dca41384.1.exon2;Parent=Dca41384.1 |
| scaffold459 |
Augustus |
exon |
236244 |
236433 |
. |
+ |
. |
ID=Dca41384.1.exon3;Parent=Dca41384.1 |
| scaffold459 |
Augustus |
exon |
237920 |
238571 |
. |
+ |
. |
ID=Dca41384.1.exon4;Parent=Dca41384.1 |
