Dca41386.1
Annotation
- 4-exons
- f-1
- sp|B9HF44_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_217280#GO:0019898;GO:0009654;GO:0005509;GO:0015979#1F1P2C
- AT2G28605.1 | Symbols: | Photosystem II reaction center PsbP family protein | chr2:12254911-12255689 FORWARD LENGTH=232
- Repeat List (scaffold459)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41386.1 |
22 |
219 |
223 |
61.88 |
198 |
69 |
3e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HF44_POPTR |
12 |
204 |
204 |
94.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41386.1 |
25 |
219 |
223 |
55.6 |
195 |
64 |
3e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G28605.1 |
48 |
232 |
232 |
79.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold459 |
Augustus |
mRNA |
257541 |
260997 |
. |
+ |
. |
ID=Dca41386.1;Parent=Dca41386 |
| scaffold459 |
Augustus |
exon |
257541 |
257611 |
. |
+ |
. |
ID=Dca41386.1.exon1;Parent=Dca41386.1 |
| scaffold459 |
Augustus |
exon |
258097 |
258268 |
. |
+ |
. |
ID=Dca41386.1.exon2;Parent=Dca41386.1 |
| scaffold459 |
Augus-PASA |
exon |
259182 |
259337 |
. |
+ |
. |
ID=Dca41386.1.exon3;Parent=Dca41386.1 |
| scaffold459 |
Augus-PASA |
exon |
260725 |
260997 |
. |
+ |
. |
ID=Dca41386.1.exon4;Parent=Dca41386.1 |
