Carnation DB

Dca41434.1

Annotation

6-exons
f-1
sp|F6I2W2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02880#unknown#0F0P0C
Os08t0230200-02 Similar to cysteine-type endopeptidase/ ubiquitin thiolesterase.
Repeat List (scaffold46)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41434.1	241	474	481	29.31	234	60	1e-79
Target_name	Start	End	Length	Cov(%)
sp\|F6I2W2_VITVI	75	309	327	71.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41434.1	240	471	481	22.45	232	47	2e-55
Target_name	Start	End	Length	Cov(%)
Os04t0606500-01	239	469	483	47.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold46	Augus-PASA	mRNA	133646	139597	.	+	.	ID=Dca41434.1;Parent=Dca41434
scaffold46	Augus-PASA	exon	133646	133981	.	+	.	ID=Dca41434.1.exon1;Parent=Dca41434.1
scaffold46	Augustus	exon	134488	134867	.	+	.	ID=Dca41434.1.exon2;Parent=Dca41434.1
scaffold46	Augustus	exon	137643	137823	.	+	.	ID=Dca41434.1.exon3;Parent=Dca41434.1
scaffold46	Augustus	exon	138660	138815	.	+	.	ID=Dca41434.1.exon4;Parent=Dca41434.1
scaffold46	Augustus	exon	139122	139330	.	+	.	ID=Dca41434.1.exon5;Parent=Dca41434.1
scaffold46	Augustus	exon	139414	139597	.	+	.	ID=Dca41434.1.exon6;Parent=Dca41434.1