Dca41450.1
Annotation
- 4-exons
- f-1
- sp|B9GR21_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_409488#GO:0003677;GO:0003713;GO:0008270;GO:0006355#3F1P0C
- AT4G00980.1 | Symbols: | zinc knuckle (CCHC-type) family protein | chr4:422732-424580 REVERSE LENGTH=488
- Repeat List (scaffold46)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41450.1 |
23 |
487 |
520 |
37.88 |
465 |
41 |
2e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GR21_POPTR |
1 |
447 |
459 |
97.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41450.1 |
16 |
495 |
520 |
33.26 |
480 |
35 |
2e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G00980.1 |
11 |
459 |
488 |
92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold46 |
Augustus |
mRNA |
247936 |
250456 |
. |
- |
. |
ID=Dca41450.1;Parent=Dca41450 |
| scaffold46 |
Augustus |
exon |
247936 |
248992 |
. |
- |
. |
ID=Dca41450.1.exon1;Parent=Dca41450.1 |
| scaffold46 |
Augustus |
exon |
249099 |
249189 |
. |
- |
. |
ID=Dca41450.1.exon2;Parent=Dca41450.1 |
| scaffold46 |
Augustus |
exon |
249498 |
249603 |
. |
- |
. |
ID=Dca41450.1.exon3;Parent=Dca41450.1 |
| scaffold46 |
Augustus |
exon |
250148 |
250456 |
. |
- |
. |
ID=Dca41450.1.exon4;Parent=Dca41450.1 |
