Dca41452.1
Annotation
- 3-exons
- f-1
- sp|A9PEZ7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1072377#GO:0005634;GO:0004842;GO:0008270;GO:0007275;GO:0006511#2F2P1C
- sp|B9SBH0_RICCO#Ubiquitin ligase SINAT3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0718310#GO:0005634;GO:0004842;GO:0008270;GO:0007275;GO:0006511#2F2P1C
- Repeat List (scaffold46)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41452.1 |
7 |
68 |
68 |
36.76 |
62 |
41 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C4JAS6_MAIZE |
4 |
65 |
269 |
23.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41452.1 |
1 |
256 |
256 |
90.62 |
256 |
91 |
2e-140
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0293400-01 |
94 |
349 |
350 |
73.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold46 |
Augustus |
mRNA |
257860 |
260582 |
. |
+ |
. |
ID=Dca41452.1;Parent=Dca41452 |
| scaffold46 |
Augustus |
exon |
257860 |
257880 |
. |
+ |
. |
ID=Dca41452.1.exon1;Parent=Dca41452.1 |
| scaffold46 |
Augustus |
exon |
259023 |
259409 |
. |
+ |
. |
ID=Dca41452.1.exon2;Parent=Dca41452.1 |
| scaffold46 |
Augustus |
exon |
260220 |
260582 |
. |
+ |
. |
ID=Dca41452.1.exon3;Parent=Dca41452.1 |
