Dca4146.1
Annotation
- 3-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold11520)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4146.1 |
1 |
785 |
785 |
57.07 |
785 |
57 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
557 |
1326 |
1333 |
57.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4146.1 |
1 |
779 |
785 |
43.05 |
779 |
42 |
6e-175
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
591 |
1389 |
1401 |
57.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11520 |
Augustus |
mRNA |
11201 |
13765 |
. |
+ |
. |
ID=Dca4146.1;Parent=Dca4146 |
| scaffold11520 |
Augustus |
exon |
11201 |
11957 |
. |
+ |
. |
ID=Dca4146.1.exon1;Parent=Dca4146.1 |
| scaffold11520 |
Augustus |
exon |
12064 |
12272 |
. |
+ |
. |
ID=Dca4146.1.exon2;Parent=Dca4146.1 |
| scaffold11520 |
Augustus |
exon |
12374 |
13765 |
. |
+ |
. |
ID=Dca4146.1.exon3;Parent=Dca4146.1 |
