Carnation DB

Dca41536.1

Annotation

7-exons
f-1
sp|D7TK00_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g02770#GO:0008124;GO:0006729#1F1P0C
AT1G29810.1 | Symbols: | Transcriptional coactivator/pterin dehydratase | chr1:10435606-10437406 REVERSE LENGTH=187
Repeat List (scaffold461)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41536.1	22	180	181	52.48	159	60	7e-50
Target_name	Start	End	Length	Cov(%)
sp\|D7TK00_VITVI	17	175	176	90.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41536.1	55	178	181	41.43	124	61	4e-43
Target_name	Start	End	Length	Cov(%)
AT1G29810.1	60	183	187	66.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold461	Augus-PASA	mRNA	112332	114245	.	+	.	ID=Dca41536.1;Parent=Dca41536
scaffold461	Augus-PASA	exon	112332	112379	.	+	.	ID=Dca41536.1.exon1;Parent=Dca41536.1
scaffold461	Augus-PASA	exon	112468	112499	.	+	.	ID=Dca41536.1.exon2;Parent=Dca41536.1
scaffold461	Augus-PASA	exon	113232	113329	.	+	.	ID=Dca41536.1.exon3;Parent=Dca41536.1
scaffold461	Augus-PASA	exon	113445	113530	.	+	.	ID=Dca41536.1.exon4;Parent=Dca41536.1
scaffold461	Augus-PASA	exon	113603	113726	.	+	.	ID=Dca41536.1.exon5;Parent=Dca41536.1
scaffold461	Augus-PASA	exon	113850	113918	.	+	.	ID=Dca41536.1.exon6;Parent=Dca41536.1
scaffold461	Augus-PASA	exon	114157	114245	.	+	.	ID=Dca41536.1.exon7;Parent=Dca41536.1